Ruth D. Yanai's Publications

Journal Articles:

Homyak, P.M., R.D. Yanai, D.A. Burns, R.D. Briggs, and R.H. Germain. 2008. Nitrogen immobilization by wood chip application: protecting water quality in a northern hardwood forest.  Forest Ecology and Management 255: 2589-2601.  PDF

Blum, J., A.A. Dasch, S.P. Hamburg, R.D.Yanai, and M.A. Arthur. 2008. Use of foliar Ca/Sr discrimination and 87Sr/86Sr ratios to determine soil Ca sources to sugar maple foliage in a northern hardwood forest.  Biogeochemistry 87(3):287-296  PDF HTML

Park, B.B., R.D. Yanai, T.J. Fahey, T.G. Siccama, S.W. Bailey, J.B. Shanley, and N.L. Cleavitt. 2008. Fine root dynamics and forest production across a calcium gradient in northern hardwood and conifer ecosystems.  Ecosystems 11(2):325-341 PDF

Lucash, M.S., D.M. Eissenstat, J.D. Joslin, K.J. McFarlane and R.D. Yanai. 2007.Estimating nutrient uptake by mature tree roots under field conditions: challenges and opportunities. Trees - Structure and Function 21(6):593-603. PDF

Nezat, C.A., J.D. Blum, R.D. Yanai and S.P. Hamburg. 2007A sequential extraction to selectively dissolve apatite for determination of soil nutrient pools with an application to Hubbard Brook Experimental Forest, New Hampshire, USA. Applied Geochemistry  22:  2406–2421 PDF

Park, B.B., R.D. Yanai, M.A. Vadeboncoeur, and S.P. Hamburg.  2007. Estimating root biomass in rocky soils using pits, cores and allometric equations. Soil Sci. Soc. Am. J. 71:206-213. PDF

Yanai, R.D., B.B. Park, and S.P. Hamburg.  2006. The vertical and horizontal distribution of roots in northern hardwoods of varying age.  Can. J. For. Res. 36(2): 450-459.     PDF

McFarlane, K.J. and R.D. Yanai. 2006. Measuring nitrogen and phosphorus uptake by intact roots of mature Acer saccharum Marsh., Pinus resinosa Ait., and Picea abies (l.) Karst. Plant and Soil 279(1-2): 163-172. PDF

Wang, X., D.A. Burns, R.D. Yanai, R.D. Briggs, R.H. Germain. 2006. Changes in Stream Chemistry and Nutrient Export Following a Partial Harvest in the Catskill Mountains, New York, USA. For. Ecol. Manag. 223:103-112. PDF

Lucash, M.S., R.D. Yanai, and J.D. Joslin.  2005.  Temporal variation in nutrient uptake capacity by intact roots of mature loblolly pine.  Plant and Soil 272:253-262. PDF

Fahey, T.J., T.G. Siccama, C.T. Driscoll, G.E. Likens, J. Campbell, C.E. Johnson, J.J. Battales, J.D.Aber, J.J. Cole, M.C. Fisk, P.M. Groffman, S.P. Hamburg, R.T. Holmes, P.A. Schwarz, and R.D. Yanai. 2005. The biogeochemistry of carbon at Hubbard Brook. Biogeochemistry 75(1):109-176. PDF

Yanai, R.D., J.D. Blum, S.P. Hamburg, M.A. Arthur, C.A. Nezat, T.G. Siccama.  2005.  New insights into calcium depletion in northeastern forests.  Journal of Forestry. 103: 14-20.  PDF

Yanai, R.D., R.P. Phillips, M.A. Arthur, T.G. Siccama, and E. Hane.  2005.  Spatial and temporal variation in calcium and aluminum in northern hardwood forest floors.  Water, Air, and Soil Pollution. 160: 109-118. PDF

Park, B.B., R.D. Yanai, J.M. Sahm, D.K. Lee and L.P. Abrahamson.  2004.  Wood ash effects on plant and soil in a willow bioenergy plantation. Biomass and Bioenergy.  28(4):355-365. PDF

Nyland, R.D, Ray, D.G., R.D. Yanai.  2004.  Height Development of upper-canopy trees within even-aged Adirondack northern hardwood stands.  N. J. Appl. For. 21:117-122. PDF

Park, B.B., R.D. Yanai, J.M. Sahm, B.D. Ballard, and L.P. Abrahamson.  2004.  Wood ash effects on soil solution and nutrient budgets in a willow bioenergy plantation.  Water, Air, and Soil Pollution 159:209-224. PDF

Phillips, R.P. and R.D. Yanai.  2004.  The effects of AlCl3 additions on rhizosphere soil and fine root chemistry of sugar maple (Acer saccharum).  Water, Air, and Soil Pollution 159: 339-356. PDF

Yanai, R.D., D.G. Ray, and T.G. Siccama.  2004.  Lead reduction and redistribution in the  forest floor in New Hampshire northern hardwoods.  J. Environ. Qual. 33:141-148. PDF

Yanai, R.D., P. Sollins, and M.S. Lucash.  2003.  Ecosystem ecology: in pursuit of principles.  Ecology 84:1640. PDF

Yanai, R.D., H. Majdi, and B.B. Park.  2003.  Measured and modeled nutrient concentrations in bulk and rhizosphere soil in a Norway spruce stand.  Plant and Soil 257:133-142. PDF

Yanai, R.D., S.V. Stehman, M.A. Arthur, C.E. Prescott, A.J. Friedland, T.G. Siccama, and D. Binkley.  2003.  Detecting change in forest floor carbon.  Soil Sci. Soc. Am. J. 67:1583-1593.  PDF

Hamburg, S,P., R.D. Yanai, M.A. Arthur, J.D. Blum and T.G. Siccama.  2003.  Biotic control of calcium cycling in northern hardwood forests: acid rain and aging forests.  Ecosystems 6: 399-404.  PDF

Yanai, R.D., W.S. Currie, and C.L. Goodale.  2003.  Soil carbon dynamics following forest harvest:  an ecosystem paradigm reviewed.  Ecosystems 6:197-212.  PDF

Yanai, R.D. and D.M. Eissenstat. 2003. Coping with herbivores and pathogens: a model of optimal root turnover. Functional Ecology 16:865-869.  PDF

Bouma, T.J., D.M. Eissenstat, R.D. Yanai, U. Hartmond, L. Wang, D. Flores, and A. Elkin.  2001.  Estimating age-dependent costs and benefits of roots with contrasting lifespan: comparing apples and oranges.  New Phytol. 150:685-695.  PDF

Yanai, R.D., M.A. Arthur, T.G Siccama, and C.A. Federer.  2000.  Challenges of measuring forest floor organic matter dynamics: repeated measures from a chronosequence.  For. Ecol. Manage. 138:273-283. PDF

Arthur, M.A., and R.D. Yanai.  2000.  Distinguishing the effects of environmental stress and forest succession on changes in the forest floor.  Korean J. Ecol. 23:83-88. PDF

Eissenstat, D.M., C. E. Wells, R.D. Yanai and J. L. Whitbeck.  2000.  Building roots in a changing environment: implications for root longevity.  New Phytol. 147:33-42. PDF

Nyland, R.D., D.G. Ray, R.D. Yanai, R.D. Briggs, L. Zhang, R. Cymbala, and M.J. Twery.  2000.  Early cohort development following even-age reproduction method cuttings in New York northern hardwoods.  Can. J. For. Res. 30:67-75. PDF

Yanai, R.D., T.G Siccama, M.A. Arthur, C.A. Federer, and A.J. Friedland.  1999.  Accumulation and depletion of base cations in forest floors in the northeastern US.  Ecology 80:2774-2787. PDF

Arthur, M. A., T.G. Siccama, and R.D. Yanai.  1999.  Calcium and magnesium in wood of six northern hardwood forest species: relations to site characteristics.  Can. J. For. Res. 29:339-346. PDF

Taylor, L. A., M.A. Arthur, and R.D. Yanai.  1999.  Forest floor microbial biomass across a northern hardwood successional sequence.  Soil Biol. Biochem. 31:431-439. PDF

Ray, D.G., R.D. Nyland, and R.D. Yanai.  1999.  Patterns of early cohort development following shelterwood cutting in three Adirondack northern hardwood stands.  Forest Ecol. Manag. 119:1-11. PDF

Yanai, R.D., M.Twery, and S.L. Stout.  1998.  Woody understory reponse to changes in overstory density: thinning in Allegheny Hardwoods.  Forest Ecol. Manag. 102:45-60.  PDF

Yanai, R.D.  1998.  The effect of whole-tree harvest on phosphorus cycling in a northern hardwood forest. Forest Ecol. Manag. 104:281-295. PDF

Eissenstat, D.M. and R.D. Yanai.  1997.  Ecology of root lifespan. Adv. Ecol. Res. 27:1-60.  PDF

Williams, M., and R.D. Yanai.  1996.  Multi-dimensional sensitivity analysis and ecological implications of a nutrient uptake model.  Plant and Soil 180:311-324.   PDF

Muetzelfeldt, R. and R.D. Yanai.  1996.  Model transformation rules and model disaggregation.  Science of the Total Environment 183:25-31.  PDF

van Heerden, K. and R.D. Yanai.  1995.  Effects of stresses on forest growth in models applied to the Solling spruce site.  Ecological Modeling 83:273-282.  PDF

Yanai, R.D.  1994.  A steady-state model of nutrient uptake improved to account for newly-grown roots. Soil. Sci. Soc. Am. J. 58:1562-1571.  PDF

Weinstein, D.A. and R.D. Yanai.  1994.  Integrating the effects of simultaneous multiple stresses on plants using the simulation model TREGRO.  J. Environ. Qual. 23:418-428.  PDF

Siccama, T.G., S.P. Hamburg, M.A. Arthur, R.D. Yanai, F.H. Bormann, and G.E. Likens.  1994.  Corrections to allometric equations and plant tissue chemistry for Hubbard Brook Experimental Forest.  Ecology 75:246-248.  PDF

Yanai, R.D.  1992.  The phosphorus budget of a 70-year old northern hardwood forest.  Biogeochemistry 17:1-22.  PDF

Yanai, R.D.  1992.  Competitive interactions between Norway Spruce and Scots Pine at Gisburn Forest, North England.  Forestry 65:435-451.  PDF

Yanai, R.D.  1991.  Soil solution phosphorus dynamics in a whole-tree-harvested northern hardwood forest. Soil Sci. Soc. Am. J. 55:1746-1752.  PDF

Weinstein, D.A., R.M. Beloin, and R.D. Yanai.  1991.  Modeling changes in red spruce carbon balance and allocation in response to interacting ozone and nutrient stress.  Tree Phys. 9:127-146.  PDF

Book Chapters and Reports

Eissenstat, D.M. and R.D. Yanai.  2002.  Root lifespan, turnover and efficiency.  Pp. 221-238 in: Y. Waisel, A. Eshel, and U. Kafkafi (eds.). Plant Roots: The Hidden Half. 3rd Edition.  New York: Marcel Dekker, Inc.  PDF

Currie, W.S., R.D. Yanai, K. Piatek, C. Prescott and C.L. Goodale.  2003.  Processes affecting carbon storage in the forest floor and in downed woody debris.  Pp. 135-147 in Kimble, J. M. et al., Eds., The Potential for U.S. Forests to Sequester Carbon and Mitigate the Greenhouse Effect.  Lewis, Boca Raton, FL.  PDF

Kelly, J.M. and R.D. Yanai.  1997.  Modeling nutrient uptake as a component of loblolly pine response to environmental stress. In: R.A. Mickler and S. Fox, eds. The Productivity and Sustainability of Southern Forest Ecosystems in a Changing Environment. Ecological Studies Volume 128, pp. 293-304. Springer-Verlag New York, Inc. Full Text (PDF)

Yanai, R.D., R.C. Santore, and C.G. Zollweg.  1998.  Using the soil model YASE alone or in combination with TREGRO. Model Description and User's Guide, Version 3.0.2. Electric Power Research Institute.

Yanai, R.D., T.J. Fahey, and S.L. Miller.  1995.  Efficiency of nutrient acquisition by fine roots and mycorrhizae. In: Smith, W.K. and T.M. Hinckley, eds. Resource Physiology of Conifers, pp. 75-103. Academic Press, New York PDF

Weinstein, D.A., R.M. Beloin, R.D. Yanai, and C.G. Zollweg.  1992.  The Response of Plants to Interacting Stresses: TREGRO Version 1.74. Description and Parameter Requirements. Electric Power Research Institute TR-101061.

Weinstein, D.A., R.D. Yanai, C.W. Chen, and L.E. Gomez.  1991.  Models to assess the response of vegetation to global change.  Topical Report EN-7366.  Electric Power Research Institute.  PDF

Publications in Revision/Review:

Lucash, M.S., R.D. Yanai, and J.D. Joslin.  Nutrient uptake by intact and disturbed roots of loblolly pine seedlings. Environmental and Experimental Botany (in revision)

Park, B.B. and R.D. Yanai.  Site quality affects nutrient concentrations of seedling and mature sugar maple and American beech.  Tree Physiology. (in revision)

Ray, David, R.D. Yanai and Ralph Nyland. The link between shade tolerance and growing space occupancy: evidence from developing northern hardwood stands. Forest Ecology and Management (in revision)

Nezat, C.A., J.D. Blum, R.D. Yanai, S.P. Hamburg, and B.B. Park. Mineral sources of calcium and phosphorus in soils of the northeastern USA.  Soil Science Society of America Journal (in review)

Yanai, R.D., M.C. Fisk, T.J. Fahey, N.L. Cleavitt, and B.B. Park. Identifying roots of northern hardwood species: patterns with diameter and depth.  Canadian Journal of Forest Research (In review)

Papers Presented at Meetings (Last Five Years):

Yanai, R.D., S.P. Hamburg, J.D. Blum, M.A. Arthur, M. Acker, F.R. Fatemi, and M.A. Vadeboncoeur. 2006. What controls calcium budgets in northern hardwood forests: species composition or parent material? Soil Sci. Soc. Am. Annual Meeting.

Bohn, K.K. and R.D. Yanai. 2006. Effects of different partial cutting treatments on structural dynamics in uneven-aged northern hardwood stands. Ecol. Soc. Am. Annual Meeting.

Homyak, P.M., R.D. Yanai, D. Burns, R.H. Germain, and R.D. Briggs. 2006. Woodchips: a potential best management practice to protect water quality following forestry operations. Ecol. Soc. Am. Annual Meeting.

Park, B. B., R.D. Yanai, and R.H. Germain. 2006. Effects of silvicultural treatments on carbon and nutrient storage of coarse woody debris in the Catskill region. Ecol. Soc. Am. Annual Meeting.

Fatemi, F.R., R.D. Yanai, S.P. Hamburg, and M.A. Arthur. 2006. Nutrient contents and aboveground biomass in developing northern hardwood stands. Ecol. Soc. Am. Annual Meeting.

Yanai, R.D., P.J. Lilly, and B.B. Park. 2006. Patterns of soil acidity and base saturation 14 to 40 years following in northern hardwood sites in New York, Massachusetts, Vermont and New Hampshire. Ecol. Soc. Am. Annual Meeting.

Yanai, R.D., B.B. Park, C.A. Nezat, and J.D. Blum. 2005. Apatite as a Calcium Source to Forests in NY State. New York State Energy Research and Development Authority’s Environmental Monitoring, Evaluation and Protection Annual Conference.

Yanai, R.D., B.B. Park, C.A. Nezat and J.D. Blum. 2005. Apatite as a Calcium Source to Forests.  Ecol. Soc. Am. Annual Meeting.

Bohn, K.K. and R.D. Yanai.  2005.  Spatial distribution of trees in northern hardwoods after simulated selection system silviculture and diameter-limit cutting.  Ecol. Soc. Am. Annual Meeting.

Fatemi, F.R. and R.D. Yanai.  2005.  Aboveground biomass and nutrient content in developing northern hardwood stands.  Ecol. Soc. Am. Annual Meeting.

Homyak, P.M. and R.D. Yanai.  2005.  Nitrogen immobilization by woodchip application: protecting water quality in a northern hardwood forest.  Ecol. Soc. Am. Annual Meeting

Park, B.B. and R.D. Yanai.  2005.  Cross-site study of fine root biomass and productivity along a calcium supply gradient in north temperate forest

.  Ecol. Soc. Am. Annual Meeting.

Yanai, R.D., B.B. Park, and S.P. Hamburg.  2004.  Root distribution with depth in young and old northern hardwood stands measured using quantitative soil pits.  Ecol. Soc. Am. Annual Meeting.

Park, B.B., R.D. Yanai, and T.J. Fahey.  2004.  Biomass and distribution of fine roots in hardwoods and softwoods across a calcium gradient in northeastern America.  Ecol. Soc. Am. Annual Meeting.

Lucash, M.S., J.D. Joslin, and R.D. Yanai.  2004.  Respiratory costs of ammonium and nitrate uptake in intact roots of white pine seedlings.  Ecol. Soc. Am. Annual Meeting.

Lucash, M.S., R.D. Yanai, J.D. Joslin, and K.J. McFarlane.  2004.  Measuring uptake by mature trees: challenges and opportunities.  Soil Sci. Soc. Am. Annual Meeting.

Yanai, R.D. and K.J. McFarlane.  2004.  Site more important than species in predicting nutrient uptake capacity in two Colorado Rocky Mountain forests.  Soil Sci. Soc. Am. Annual Meeting.

Yanai, R.D., M.S. Lucash, S.E. Kulpa, J.D. Joslin, and K.J. McFarlane.  2003.  Diameter distributions of fine roots of twelve tree species.  Soil Sci. Soc. Am. Annual Meeting.

Lucash, M.S., J.D. Joslin, O. Abelleira, R.D. Yanai, and J.M. Scholberg.  2003.  Measuring nutrient uptake in intact plant-soil systems.  Soil Sci. Soc. Am. Annual Meeting.

Lucash, M.S., O. Abelleira, J.D. Joslin, R.D. Yanai, and J.M. Scholberg.  2003.  Effects of disturbance on nitrate uptake of loblolly pine seedlings.  Ecol. Soc. Am. Annual Meeting.           

Yanai, R.D., J.D. Blum, M.A. Arthur and S.P. Hamburg.  2003.  Whether repeated harvest and acid rain threaten Ca supply in northern hardwood forests may depend on weathering of apatite. Ecol. Soc. Am. Annual Meeting.

Lucash, M.S., R.D. Yanai, and J.D. Joslin.  2003.  Diurnal Changes in Nitrogen uptake and root respiration in Loblolly pine seedlings.  Ecol. Soc. Am. Annual Meeting.

Yanai, R.D., S.E. Kulpa, and J.D. Joslin.  2003.  Diameter distributions of fine roots of twelve tree species.  Soil Sci. Soc. Am. Annual Meeting.

McFarlane, K.M., R.D. Yanai, J.D. Joslin, and M.S. Lucash. 2003.  Measuring nutrient uptake: do roots deplete solution to a constant concentration?  Soil Sci. Soc. Am. Annual Meeting.

Lucash, M.S., J.M.S. Scholberg, and R.D. Yanai.  2003.  Using SUM columns to measure nutrient uptake and root respiration of loblolly pine seedlings.  Soil Sci. Soc. Am. Annual Meeting.

Invited Presentations (Last Five Years):

Forestry Commission, Northern Research Station, Penicuik, Scotland, June 29, 2007

School of GeoSciences, University of Edinburgh, Edinburgh, Scotland, June 20, 2007

EECB Colloquium, University of Nevada, Reno, March 15, 2007

Northeastern Ecosystem Research Cooperative, Durham, New Hampshire, October 26, 2006.

Forestry and Forest Products Research Institute, Tsukuba, Japan, July 5, 2006.

University of Tokyo Graduate School of Agriculture and Life Sciences, Tokyo, May 23 and July 7, 2006.

SUNY College of Environmental Science and Forestry, Alpha Sigma Xi Commencement Address, Syracuse, NY, April 22, 2005.

Yale School of Forestry and Environmental Studies, New Haven, May 31, 2003.

Ecosystems Center, Marine Biological Laboratory, Woods Hole, April 9, 2002.

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last updated 04/18/2008